Choice E is best. The pronoun that in A and B should be deleted, since the pronoun one is sufficient to introduce the modifier and the sentence is more fluid without that. In B and C, it and that it are intrusive and ungrammatical: the idiom is “believe x to be y.” In the context of this sentence, the infinitive to be is more appropriate than the limited present-tense is in referring to an event that occurred long ago but has been discovered only recently. Finally, A, B, and D lack of and so illogically equate this particular explosion with the whole class of explosions to which it belongs: it is not a type but possibly one of a type.